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Pan-genomics: Applications, Challenges, and Future Prospects

Langue : Anglais

Coordonnateurs : Barh Debmalya, Soares Siomar C., Tiwari Sandeep, Azevedo Vasco Ariston De Car

Couverture de l’ouvrage Pan-genomics: Applications, Challenges, and Future Prospects

Pan-genomics: Applications, Challenges, and Future Prospects covers current approaches, challenges and future prospects of pan-genomics. The book discusses bioinformatics tools and their applications and focuses on bacterial comparative genomics in order to leverage the development of precise drugs and treatments for specific organisms. The book is divided into three sections: the first, an "overview of pan-genomics and common approaches,” brings the main concepts and current approaches on pan-genomics research; the second, ?case studies in pan-genomics,” thoroughly discusses twelve case, and the last, ?current approaches and future prospects in pan-multiomics”, encompasses the developments on omics studies to be applied on bacteria related studies.

This book is a valuable source for bioinformaticians, genomics researchers and several members of biomedical field interested in understanding further bacterial organisms and their relationship to human health.

1. Overview, applications, and future perspectives of Pan-genomics2. Bioinformatics approaches applied in Pan-genomics and their challenges 3. Evolutionary pan-genomics and applications4. Insights into old and new enemies: Pan-genomics of Corynebacterium diphtheriae and Corynebacterium ulcerans5. Pan-genomics of Veterinary pathogens: Corynebacterium psedotuberculosis 6. Pan-genomics of Plant pathogens and its applications7. Pan-genomics food pathogens and its applications8. Pan-genomics of aquatic animal pathogens and its applications9. Pan-genomics of model bacteria and their outcomes 10. Pan-genomics of multi drug-resistant human pathogenic bacteria and their resistome11. Pan-genomics of Virus and its applications12. Pan-genomics of Fungi and its applications13. Pan-genomics of Algae and applications 14. Pan-genomics of Plants and its applications15. Pan-cancer analysis and applications 16. Reverse vaccinology and drug target identification through Pan-genomics 17. Pan-metagenomics and its applications18. Pan-transcriptomics and its applications19. Pan-proteomics and its applications20. Pan-metabolomics and its applications 21. Pan-interactomics and its applications

bioinformaticians, genomics scientists, microbiologists, graduate students on diverse related fields
Dr. Debmalya Barh is currently a Visiting Full Professor (Titular, Grade-E) in Bioinformatics and Precision Health at the Department of Genetics, Ecology, and Evolution, ICB, Federal University of Minas Gerais, Brazil and honorary scientist of the Institute of Integrative Omics and Applied Biotechnology (IIOAB), India. With over 20 years of experience, he has led academic, healthcare, molecular diagnostic, and bioinformatics industry endeavors. He works with more than 400 scientists from 100+ top ranked organizations across 40+ countries and has 220+ publications and a branded editor for 10+ cutting-edge omics related reference books. He is an expert in in precision/personalized health and integrative omics-based biomarker and target discovery in infectious and complex lifestyle diseases.
Dr Soares holds a degree in Biomedicine, with special training in Bioinformatics, Master's Degree and PhD in Genetics by Federal University of Minas Gerais – UFMG, the latter with one year of study at the Center for Biotechnology (CeBiTec), Universität Bielefeld. He holds a Post-doctorate in Bioinformatics by UFMG. He was Senior Researcher Bioinformatics at the Central Official Laboratory of the Brazilian Ministry of Fisheries and Aquaculture (2014-2015). He is currently Professor at Federal University of the Triângulo Mineiro (UFTM) since 2015, Secretary of the Southeastern regional of the Brazilian Society of Genetics (2017-current), Substitute Coordinator of the undergraduate course in Biomedicine at UFTM (2017-current) and Substitute Research and Technology Development Coordinator of UFTM (2017-current). His research interests are molecular genetics, genomic sequencing and comparative genomics of microorganisms, focusing on pan-genomics, genomic plasticity in the identification of islands of pathogenicity and virulence factors, phylogenomics, molecular epidemiology, reverse vaccination and software development.
Dr. Tiwari obtained his BSc from Deen Dayal Upadhyaya Gorakh
  • Covers the entire spectrum of pangenomics, highlighting the use of specific approaches, case studies and future perspectives
  • Discusses current bioinformatics tools and strategies for exploiting pangenomics data
  • Presents twelve case studies with different organisms in order to provide the audience with real examples of pangenomics applicability

Date de parution :

Ouvrage de 474 p.

19x23.3 cm

Disponible chez l'éditeur (délai d'approvisionnement : 14 jours).

174,92 €

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Thèmes de Pan-genomics: Applications, Challenges, and Future Prospects :

Mots-clés :

Algae; Antibiotics resistance; Antimicrobial resistance; Bacteria; Biotic and abiotic stress; Biovar; Blue-green algae; Brown algae; Cancer; Clinical application; Computational algorithms; Computational tools; Computational vaccinology; Conventional vaccinology; Copy-number; Core genome; Corynephage; Crop plants and pan-genome; Cyanobacteria; Diphtheria; DNA methylation; Drug discovery; Drug targets; Elek; Emerging pathogen; Evolutionary pan-genomics; Fish pathogen; Foodborne; Fungi; Genomic epidemiology; Genomic plasticity; Genomic surveillance; Genomics epidemiology; Germline; Gut microbiome; Heaps’ law; Horizontal gene transfer; Interologs; KeywordInteractomics; Macroalgae (seaweeds); Markers; Metabolite; Metabolomics; Metadata analysis; MetagenomicsPan-metagenome; Meta-interactomics network analysis; Microalga (phytoplankton); Microarray; Microbiota; miRNA; MLST; Model bacteria; Multivalent vaccine; Next-generation sequencing; NGS; NTTB; Orthology prediction; Pan-cancer; Pan-genome; Pan-genome approaches; Pan-genomics; Pan-metagenomics; Pan-PCR; Pan-proteomic; Pan-proteomics; Pan-regulon; Pan-resistome; Pan-transcriptome; Pan-transcriptomic; Phylogenomics; Plant pan-genome tools; Plant pathogens; Predicted interactome; Prediction models; Probiosis; Protein profiling; Protein-protein interactions; Proteomics; Proteomics tools; Red algae; Reference genome; Resistome; Reverse vaccinology; Ribotyping; RNA-Seq; Somatic; Spoligotyping; Systems biology; Taxonomy; Vaccine targets; Vaccines; Veterinary pathogens; Viral pathogens; Virulence; Yeast-two-hybrid; Zoonotics pathogens